The manga volumes are broken down by cases. Most cases span multiple chapters. All chapters of the same case are grouped together by the same color. Sigificant events and important characters' appearances are noted in the "notes" section.

Note: The case titles are not official. I chose descriptive titles that make sense to me, so they may be different from how others describe them.

  File.1 : The Modern-Day Holmes

 Amusement Park Murder Case

  File.2 : The Shrunken Detective

 No case, as Conan is introduced

 

  File.3 : The Left-Out Detective

 Kidnapped Little Girl Case part 1

 

  File.4 : The 6th Chimney

 ................................................ part 2

 

  File.5 : One More Criminal

 ................................................ part 3

 

  File.6 : Confused Detective To Great Detective

 Music Idol Case part 1

 Voice changing bow-tie introduced

  File.7 : The Bloody Idol

 ............................. part 2

 

  File.8 : A Person Who Looks Like You

 ............................. part 3

 

  File.9 : Unhappy Misunderstanding

 ............................. part 4

 

  File.1 : Lucrative Shadowing

 The Man Who Was Followed Case part 1

 Power-kick shoes introduced

  File.2 : The Perfect Alibi

 ............................................................... part 2

 

  File.3 : The Photos Speak

 ............................................................... part 3

 

  File.4 : The Missing Man

 1 Billion Yen Robbery Case part 1

 Eye-glasses tracking device introduced

  File.5 : The Pitiful Girl

 .................................................. part 2

 

  File.6 : Chase The Giant!

 .................................................. part 3

 

  File.7 : The Devilish Woman

 .................................................. part 4

 Gin & Vodka appear; the "Black Organization" introduced

  File.8 : Mansion of Terror

 Haunted House Case part 1

 Ayumi, Genta, & Mitsuhiko first appear

  File.9 : The Vanishing Children

 ........................................ part 2

 Elastic suspenders introduced

  File.10 : Nightmare In The Cellar

 ........................................ part 3

 

  File.1 : The Hatamoto Family

 Hatamoto Family Ship Case part 1

 

  File.2 : Secret Of The Impenetrable Room

 ................................................... part 2

 

  File.3 : Location Of The Inheritance

 ................................................... part 3

 

  File.4 : Family Obliteration

 ................................................... part 4

 

  File.5 : Trap-Springer In The Dark

 ................................................... part 5

 Tranquilizer watch introduced

  File.6 : The Dream That Won't Come True

 ................................................... part 6

 

  File.7 : Curious Presents

 Mysterious Presents Case part 1

 

  File.8 : The Same Person

 ................................................. part 2

 

  File.9 : Mystery of August 3rd

 ................................................. part 3

 

  File.10 : Safe Before Your Eyes

 ................................................. part 4

 

  File.1 : The Armored Knight

 Museum Case part 1

 

  File.2 : Dying Message

 ........................... part 2

 

  File.3 : The Pen That Cannot Write

 ........................... part 3

 

  File.4 : Running Into The Two

 Train Bomb Case part 1

 Gin & Vodka appear ; eye-glasses hearing device introduced

  File.5 : The Four In The Green Car

 ................................ part 2

 

  File.6 : The Last 10 Seconds Of Terror

 ................................ part 3

 

  File.7 : Code Sheet Obtained!!

 Code Sheet Case part 1

 

  File.8 : The ABC's Of Deciphering...

 ................................. part 2

 

  File.9 : An Answer and Another Answer

 ................................. part 3

 

  File.10 : The Shining Fish's True Form

 ................................. part 4

 

  File.1 : A Weirdo... The Bandaged Man

 Bandaged Man Case part 1

 

  File.2 : The First Victim!

 ....................................... part 2

 

  File.3 : Ran's In Trouble!

 ....................................... part 3

 

  File.4 : The Attack In The Dark!

 ....................................... part 4

 

  File.5 : Identity Of The Killer!

 ....................................... part 5

 

  File.6 : The Karaoke Killer!

 Karaoke Case part 1

 

  File.7 : Suicide or Homicide?

 .......................... part 2

 

  File.8 : Mystery Hidden In The Song

 .......................... part 3

 

  File.9 : How Lives Cross...

 .......................... part 4

 

  File.10 : An Unfamiliar Visitor

 Conan Kidnapped Case part 1

 "Night Baron" first appears

  File.11 : Escape and Pursuit

 ............................................ part 2

 

  File.1 : Truth Under The Mask

 ............................................ part 3

  File.2 : Three Visitors?

 Three Visitors Case part 1

 

  File.3 : Alibis Of The Three

 ..................................... part 2

 

  File.4 : Answering Machine Mystery

 ..................................... part 3

 

  File.5 : Words On The Chest

 ..................................... part 4

 

  File.6 : Formation! The Detective Boys

 Missing Body Case part 1

 "The Young Detectives" transmitter badges introduced

  File.7 : Mysterious Brothers

 ................................... part 2

 

  File.8 : Moving Corpse Mystery

 ................................... part 3

 

  File.9 : Festival Night

 Festival Night Case part 1

 

  File.10 : A Perfect Alibi?!

 .................................... part 2

 

  File.1 : The Photo Trap

 .................................... part 3

 

  File.2 : The Invitation To Tsukikage Island

 The Moonlight Sonata Case part 1

 

  File.3 : The Piano's Curse

 ................................................... part 2

 

  File.4 : Left-Behind Music Score

 ................................................... part 3

 

  File.5 : The Hellfire Secret

 ................................................... part 4

 

  File.6 : Blood-Stained Button

 ................................................... part 5

 

  File.7 : The Secret Of The Name!!

 ................................................... part 6

 

  File.8 : Shinichi's Sweetheart!!

 Soccer Player Case part 1

 

  File.9 : Detective Ran?!

 .................................... part 2

 

  File.10 : A Time Limit On Life?!

 .................................... part 3

 

  File.1 : I've Finally Found You!!

 .................................... part 4

 

  File.2 : The Night Baron

 Night Baron Case part 1

 "Night Baron" appears

  File.3 : Virus Of Terror

 ................................. part 2

 

  File.4 : Underneath The Mark

 ................................. part 3

 

  File.5 : Ran's Tears

 ................................. part 4

 

  File.6 : Trick Of The Wind?!

 ................................. part 5

 

  File.7 : Secret Of The Falling Point

 ................................. part 6

 

  File.8 : Tragedy Of The Bride

 Teacher Bride Case part 1

 

  File.9 : Forbidden Lemon Tea?!

 ..................................... part 2

 

  File.10 : A Reason For Murder

 ..................................... part 3